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Single Cell Methylation -Small Kit – PBMCs – 4.4K

Download Full Data Analysis (55 GB)

Report Summary:

Download run summary reports (1.83 MB):  scMET_Small_PBMC_4.4K_Summary

Access the secondary analysis Amethyst tutorial – Clustering & Annotation (Jupyter notebook)*: ScaleMethyl-4k-PBMCs-Amethyst_v1.3.0.ipynb

*Jupyter installation required

Product Information:

Scale Bio Methylation Kit v1.0

Scale Bio Seq Suite: scMethylation v1.3

Scale Bio Seq Suite Methylation Handbook_RevB

Sample Information:

Sample format: cryopreserved

Species: Human, two separate male donors

Sample/Cell Type: PBMCs

Cells in dataset: 4,422

PBMC Donor 1 (S1): 2,373

PBMC Donor 2 (S2): 2,049

Sequencing Information:

Sequencing platform: NovaSeq 6000

Flow Cell: S4

Mean passing reads per cell:

PBMC Donor 1: 5,509,481

PBMC Donor 2: 4,791,442